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What Do Functional Medicine Doctors Look for in Inflammation Labs?

rubbing hands in pain

When someone hears “inflammation,” they often think of a swollen joint, an injury, or redness on the skin. But in functional medicine, we’re usually talking about something much deeper and more chronic. Low-grade, systemic inflammation plays a major role in fatigue, joint pain, brain fog, gut issues, autoimmune disease, and even hormone imbalance.


This is where functional medicine lab testing becomes a game changer. It gives us data we can use to identify why inflammation is happening, not just that it’s there.


Why Functional Medicine Cares About Inflammation

In restorative medicine, inflammation is seen as the body’s smoke alarm. It’s not the enemy, it’s a sign that something is out of balance. Maybe your immune system is reacting to food antigens, chronic infections, toxin exposure burdens are too high, or stress is out of control. Maybe your diet, blood sugar and insulin are driving the fire. A naturopathic medicine approach aims to find those root causes and calm the immune system naturally.



The Core Labs We Run to assess Functionally for Inflammation

When we evaluate inflammation, we look beyond standard labs. Here’s what we typically include or recommend through our functional lab testing panels:


  1. hs-CRP (High Sensitivity C-Reactive Protein) - This is one of the most sensitive markers for low-grade inflammation and cardiovascular risk. Even mildly elevated values can tell us that the immune system is on alert.

  2. ESR (Erythrocyte Sedimentation Rate) - A classic test used in both conventional and functional medicine. It measures how quickly red blood cells settle. A slower rates mean more inflammation. ESR is non-specific, but useful when viewed with other markers.

  3. Ferritin - Often thought of only as an iron storage marker, but it’s also an acute phase reactant. Elevated ferritin can indicate chronic inflammation even when other iron markers are normal.

  4. Fibrinogen - This marker helps assess clotting and cardiovascular risk but also increases with inflammation. High fibrinogen can explain sluggish recovery, muscle stiffness, and even brain fog.

  5. Homocysteine - An overlooked lab that connects methylation, cardiovascular health, and inflammation. Elevated levels can stem from B-vitamin deficiencies, genetics (MTHFR variants), or oxidative stress.

  6. ANA, Rheumatoid Factor, and CCP - These are classic autoimmune inflammation markers. Functional and naturopathic doctors often use them alongside specialty autoimmune panels to track immune system activation.

  7. Comprehensive Metabolic Panel (CMP) - Liver enzymes, albumin, and total protein all give clues about inflammation, oxidative stress, and detoxification capacity.



Functional Labs That Dig Deeper

When standard inflammation markers don’t tell the full story, functional labs go further. Depending on the person’s symptoms, we may look at:


Each of these tests helps us get closer to why inflammation is happening so we can actually reverse it, not just suppress it.
connecting puzzle pieces

Seeing the Whole Picture

One of the biggest differences in functional and restorative medicine is that we connect these findings across systems. Inflammation in the gut can show up as joint pain. A liver under stress can trigger skin rash flares. High insulin can amplify hormonal imbalances. It’s rarely just one thing.


By using targeted, functional lab testing, we can map out patterns, track progress, and make precise recommendations for nutrition, nutrients, or lifestyle shifts. These all calm the immune system and help to restore balance.


When to Test

If you’ve been told your labs are “normal” but you don’t feel normal, this type of testing fills in the gaps. Functional and restorative medicine doctors don’t wait for things to get bad enough for a diagnosis. We look for early signs of imbalance so you can intervene now, not years down the road.


You can order many of these functional inflammation labs directly through our Functional Lab Testing page, or if you’re in Oregon or Washington, you can book an appointment to have these reviewed as part of a functional medicine visit with one of our licensed naturopathic physicians or functional nutritionist.


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FAQs: Inflammation Labs and Functional Medicine

  1. What labs show inflammation in the body?

    1. Common inflammation markers include hs-CRP, ESR, ferritin, and fibrinogen. Functional and naturopathic medicine doctors often combine these with deeper testing such as food sensitivity, gut microbiome, and toxin panels to identify root causes of chronic inflammation.

  2. What is the best lab test for inflammation?

    1. hs-CRP is one of the most sensitive markers for ongoing inflammation and cardiovascular risk. However, the “best” test depends on your symptoms and history. A functional and restorative medicine doctor will usually order a combination of labs to see the full picture.

  3. Can inflammation show up on regular blood work?

    1. Yes, but not always. Basic panels like CBC or CMP might show subtle clues such as elevated platelets or low albumin, but these aren’t enough to identify chronic or hidden inflammation. Functional labs provide more precise and actionable data.

  4. How do functional medicine doctors reduce inflammation?

    1. They focus on finding and removing the triggers rather than masking symptoms. This can involve personalized nutrition, digestive healing, detoxification support, stress regulation, and targeted nutrients to rebalance immune and metabolic pathways.

  5. Can I order inflammation labs without seeing a doctor?

    1. Yes. Through our Functional Lab Testing page, you can order many inflammation and metabolic panels directly. If you’re in Oregon or Washington, you can also book an appointment for a full evaluation and medical interpretation.



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